miRBase entry: ggo-mir-323a

Stem-loop ggo-mir-323a


Accession
MI0020681
Description
Gorilla gorilla ggo-mir-323a precursor miRNA


Sequence

1734 reads, 142.0 reads per million, 4 experiments
ggugucaguacggcugcugcuugguacuuggagagAGGUGGUCCGUGGCGCGUUCGcuuuauuuauggcgCACAUUACACGGUCGACCUCUuugcaguaucuaauccc
((((.((((...)))).)))).((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).......

Structure
ggugucaguacggcugcugcuu      u g        G U     GC C  U    uua 
                      gguacu g agagAGGU G CCGUG  G GU CGcu   u
                      |||||| | |||||||| | |||||  | || ||||    
                      cuauga c uuUCUCCA C GGCAC  U CA gcgg   u
---------------cccuaau      - g        G U     AU A  C    uau 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr14: 85049044-85049151 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ggo-mir-323a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-323a-5p

Accession MIMAT0061309
Description Gorilla gorilla ggo-miR-323a-5p mature miRNA
Sequence 36 - AGGUGGUCCGUGGCGCGUUCG - 56
Evidence experimental
Illumina [1]

Mature ggo-miR-323a-3p

Accession MIMAT0024134
Description Gorilla gorilla ggo-miR-323a-3p mature miRNA
Sequence 71 - CACAUUACACGGUCGACCUCU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116