miRBase entry: ggo-mir-193b

Stem-loop ggo-mir-193b

Accession

MI0020685

Description

Gorilla gorilla ggo-mir-193b precursor miRNA

Sequence

ggagguuguggucucagaauCGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccaacuggcccucaaagucccgcuuuuggggucauucuggacagcgagggacucagg
.(((...((((((((((((.(((((((((((((((.((.((.((.........)).)).)).))))))))))))))).))))))))))))(((.(....).)))..)))...

Structure

--g   -------------guu            u               G  A  A  uua 
   gag                guggucucagaa CGGGGUUUUGAGGGC AG UG gu   u
   |||                |||||||||||| ||||||||||||||| || || ||   g
   cuc                uacugggguuuu gcccugaaacucccg uc ac ua   u
gga   agggagcgacaggucu            c               g  a  c  uuu

Annotation confidence Not enough data

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Genome context

chr16: 14794087-14794198 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-193b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-193b

Accession	MIMAT0024138
Description	Gorilla gorilla ggo-miR-193b mature miRNA
Sequence	21 - CGGGGUUUUGAGGGCGAGAUGA - 42
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116