miRBase entry: ggo-mir-487a

Stem-loop ggo-mir-487a


Accession
MI0020692
Description
Gorilla gorilla ggo-mir-487a precursor miRNA


Sequence

424 reads, 38.0 reads per million, 4 experiments
ugggccgucaccgucagccuucgguacuugaagaGUGGUUAUCCCUGCUGUGUUCGcuuaauuuaugacgAAUCAUACAGGGACAUCCAGUUuuucaguaucaaauacug
.((((.(.......).))))..((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))))........

Structure
ugggccgucaccgucagccuuc      u     G   UUA      C    -    - uua 
                      gguacu gaaga UGG   UCCCUG UGUG UUCG c   a
                      |||||| ||||| |||   |||||| |||| |||| |   u
                      cuauga uuuUU ACC   AGGGAC AUAC AAgc g   u
--------------gucauaaa      c     G   UAC      -    U    a uau 


Annotation confidence High
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Genome context
chr14: 85075456-85075565 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from ggo-mir-487a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-487a-5p

Accession MIMAT0061315
Description Gorilla gorilla ggo-miR-487a-5p mature miRNA
Sequence 35 - GUGGUUAUCCCUGCUGUGUUCG - 56
Evidence experimental
Illumina [1]

Mature ggo-miR-487a-3p

Accession MIMAT0024145
Description Gorilla gorilla ggo-miR-487a-3p mature miRNA
Sequence 71 - AAUCAUACAGGGACAUCCAGUU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116