miRBase entry: ggo-mir-487a

Stem-loop ggo-mir-487a

Accession

MI0020692

Description

Gorilla gorilla ggo-mir-487a precursor miRNA

Sequence

ugggccgucaccgucagccuucgguacuugaagagugguuaucccugcuguguucgcuuaauuuaugacgAAUCAUACAGGGACAUCCAGUuuuucaguaucaaauacug
.((((.(.......).))))..((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))))........

Structure

ugggccgucaccgucagccuuc      u     g   uua      c    -    - uua 
                      gguacu gaaga ugg   ucccug ugug uucg c   a
                      |||||| ||||| |||   |||||| |||| |||| |   u
                      cuauga uuuuU ACC   AGGGAC AUAC AAgc g   u
--------------gucauaaa      c     G   UAC      -    U    a uau

Annotation confidence Not enough data

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Genome context

chr14: 85075456-85075565 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ggo-mir-487a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-487a

Accession	MIMAT0024145
Description	Gorilla gorilla ggo-miR-487a mature miRNA
Sequence	71 - AAUCAUACAGGGACAUCCAGU - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116