miRBase entry: ggo-mir-411

Stem-loop ggo-mir-411


Accession
MI0020695
Description
Gorilla gorilla ggo-mir-411 precursor miRNA


Sequence

1030 reads, 84.0 reads per million, 4 experiments
ucugugugguacuuggagagAUAGUAGACCGUAUAGCGUACGcuuuaucugugacgUAUGUAACACGGUCCACUAACccucaguaucaaauccauccccgaggcuccugga
......(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))..((((.((....))....))))

Structure
-----------------ucugug       ug   a A    A      AUA       - uuu 
                       ugguacu  gag g UAGU GACCGU   GCGUACG c   a
                       |||||||  ||| | |||| ||||||   ||||||| |   u
                       acuauga  cuc C AUCA CUGGCA   UGUAUgc g   c
agguccucggagccccuaccuaa       --   c A    C      CAA       a ugu 


Annotation confidence High
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Genome context
chr14: 85046651-85046761 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from ggo-mir-411
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-411-5p

Accession MIMAT0024148
Description Gorilla gorilla ggo-miR-411-5p mature miRNA
Sequence 21 - AUAGUAGACCGUAUAGCGUACG - 42
Evidence experimental
Illumina [1]

Mature ggo-miR-411-3p

Accession MIMAT0061316
Description Gorilla gorilla ggo-miR-411-3p mature miRNA
Sequence 57 - UAUGUAACACGGUCCACUAAC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116