miRBase entry: ggo-mir-365a

Stem-loop ggo-mir-365a


Accession
MI0020697
Description
Gorilla gorilla ggo-mir-365a precursor miRNA


Sequence

1208 reads, 77.0 reads per million, 4 experiments
gccagcugguucguuaccgcagggaaaaugAGGGACUUUUGGGGGCAGAUGUguuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugcaguauuccuc
(((....)))....(((.((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).)))......

Structure
gccagcugguucgu   c      aa        AC           ----   -   uuu 
              uac gcaggg  aaugAGGG  UUUUGGGGGCA    GAU GUg   c
              ||| ||||||  ||||||||  |||||||||||    ||| |||   c
              aug cguucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
--------cuccuu   a      cg        -A           AAUa   u   cuu 


Annotation confidence High
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Genome context
chr16: 14799432-14799542 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ggo-mir-365a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-365a-5p

Accession MIMAT0061318
Description Gorilla gorilla ggo-miR-365a-5p mature miRNA
Sequence 31 - AGGGACUUUUGGGGGCAGAUGU - 52
Evidence experimental
Illumina [1]

Mature ggo-miR-365a-3p

Accession MIMAT0024150
Description Gorilla gorilla ggo-miR-365a-3p mature miRNA
Sequence 71 - UAAUGCCCCUAAAAAUCCUUAU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116