Stem-loop ggo-mir-1301

Accession

MI0020705

Description

Gorilla gorilla ggo-mir-1301 precursor miRNA

Sequence

723 reads, 62.0 reads per million, 4 experiments

cugccaagcgacCCCUAGAAUGGGGAUUGUGGGgggucgcucuaggcaccgcagcacugugcuggggaugUUGCAGCUGCCUGGGAGUGACUUcacacaguccucucugccu
...............((((..((((((((((.(((((((((((((((((.((((((((.......)).)))))).).))))).))))))))))).))))))))))))))...

Structure

cugccaagcgacCCC    AU          G           -     - c      -  gu 
               UAGA  GGGGAUUGUG Ggggucgcucu aggca c gcagca cu  g
               ||||  |||||||||| ||||||||||| ||||| | |||||| ||  c
               gucu  cuccugacac cUUCAGUGAGG UCCGU G CGUUgu gg  u
------------ucc    --          a           G     C A      a  gg 

Annotation confidence Low

Genome context

chr2A: 82109956-82110067 [+]

Mature ggo-miR-1301-5p

• Accession: MIMAT0061322
• Description: Gorilla gorilla ggo-miR-1301-5p mature miRNA
• Sequence: 13 - CCCUAGAAUGGGGAUUGUGGG - 33
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-1301-3p

• Accession: MIMAT0024158
• Description: Gorilla gorilla ggo-miR-1301-3p mature miRNA
• Sequence: 71 - UUGCAGCUGCCUGGGAGUGACUU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116