miRBase entry: ggo-mir-504

Stem-loop ggo-mir-504


Accession
MI0020710
Description
Gorilla gorilla ggo-mir-504 precursor miRNA


Sequence

374 reads, 41.0 reads per million, 3 experiments
ugaaucagcugcuguugggaGACCCUGGUCUGCACUCUAUCuguauucuuacugaaGGGAGUGCAGGGCAGGGUUUCccauacagagggcacagacuaccaccguaugg
.......(((.((((((((((((((((.((((((((((.((.(((....))).))..)))))))))).)))))))))))).))))..)))........(((.....)))

Structure
------------ugaauca   -g    -            G          -A  u   u 
                   gcu  cugu ugggaGACCCUG UCUGCACUCU  UC gua u
                   |||  |||| |||||||||||| ||||||||||  || |||  
                   cgg  gaca accCUUUGGGAC GGACGUGAGG  ag cau c
gguaugccaccaucagaca   ga    u            G          Ga  u   u 


Annotation confidence Medium
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Genome context
chrX: 138726796-138726904 [-]

Database links

Mature ggo-miR-504-5p

Accession MIMAT0024163
Description Gorilla gorilla ggo-miR-504-5p mature miRNA
Sequence 21 - GACCCUGGUCUGCACUCUAUC - 41
Evidence experimental
Illumina [1]

Mature ggo-miR-504-3p

Accession MIMAT0061325
Description Gorilla gorilla ggo-miR-504-3p mature miRNA
Sequence 57 - GGGAGUGCAGGGCAGGGUUUC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116