miRBase entry: ggo-mir-1185

Stem-loop ggo-mir-1185


Accession
MI0020720
Description
Gorilla gorilla ggo-mir-1185 precursor miRNA


Sequence

212 reads, 17.0 reads per million, 4 experiments
ccacccuuugguacuuaaagAGAGGAUACCCUUUGUAUGUUCacuugauuaauggcgaAUAUACAGGGGGAGACUCUUAUuugcguaucaaacucugucgaggaagacgc
......((((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))))...((((......)))).

Structure
------------ccaccc        u    -     GA A              a  uga 
                  uuugguac uaaa gAGAG  U CCCUUUGUAUGUUC cu   u
                  |||||||| |||| |||||  | |||||||||||||| ||    
                  aaacuaug guuU UUCUC  A GGGGGACAUAUAag gg   u
cgcagaaggagcugucuc        c    A     AG -              c  uaa 


Annotation confidence High
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Genome context
chr14: 85067224-85067333 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from ggo-mir-1185
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-1185-5p

Accession MIMAT0024173
Description Gorilla gorilla ggo-miR-1185-5p mature miRNA
Sequence 21 - AGAGGAUACCCUUUGUAUGUUC - 42
Evidence experimental
Illumina [1]

Mature ggo-miR-1185-3p

Accession MIMAT0061328
Description Gorilla gorilla ggo-miR-1185-3p mature miRNA
Sequence 59 - AUAUACAGGGGGAGACUCUUAU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116