miRBase entry: ggo-mir-1185

Stem-loop ggo-mir-1185

Accession

MI0020720

Description

Gorilla gorilla ggo-mir-1185 precursor miRNA

Sequence

ccacccuuugguacuuaaagAGAGGAUACCCUUUGUAUGUucacuugauuaauggcgaauauacagggggagacucuuauuugcguaucaaacucugucgaggaagacgc
......((((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))))...((((......)))).

Structure

------------ccaccc        u    -     GA A              a  uga 
                  uuugguac uaaa gAGAG  U CCCUUUGUAUGUuc cu   u
                  |||||||| |||| |||||  | |||||||||||||| ||    
                  aaacuaug guuu uucuc  a gggggacauauaag gg   u
cgcagaaggagcugucuc        c    a     ag -              c  uaa

Annotation confidence Not enough data

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Genome context

chr14: 85067224-85067333 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ggo-mir-1185

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-1185

Accession	MIMAT0024173
Description	Gorilla gorilla ggo-miR-1185 mature miRNA
Sequence	21 - AGAGGAUACCCUUUGUAUGU - 40
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116