Stem-loop ggo-mir-193a

Accession

MI0020721

Description

Gorilla gorilla ggo-mir-193a precursor miRNA

Literature search

1 open access papers mention ggo-mir-193a
(7 sentences)

Sequence

3277 reads, 189.0 reads per million, 4 experiments

gacgcaccccgaacuccgaggaugggagcugagggcUGGGUCUUUGCGGGCGAGAUGAgggugucgaaucAACUGGCCUACAAAGUCCCAGUucucggcccccgggaccag
.......((((............(((.(((((((((((((.(((((.((((.((.(((..........))).)).)))).))))).)))))))))))))))))))).....

Structure

gacgcac    aacuccgaggau   a             U     C    G  A   gggu 
       cccg            ggg gcugagggcUGGG CUUUG GGGC AG UGA    g
       ||||            ||| ||||||||||||| ||||| |||| || |||     
       gggc            ccc cggcucuUGACCC GAAAC UCCG UC Acu    u
--gacca    ------------   -             U     A    G  A   aagc 

Annotation confidence High

Genome context

chr5: 51826127-51826237 [-]

Mature ggo-miR-193a-5p

• Accession: MIMAT0061329
• Description: Gorilla gorilla ggo-miR-193a-5p mature miRNA
• Sequence: 37 - UGGGUCUUUGCGGGCGAGAUGA - 58
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-193a-3p

• Accession: MIMAT0024174
• Description: Gorilla gorilla ggo-miR-193a-3p mature miRNA
• Sequence: 71 - AACUGGCCUACAAAGUCCCAGU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116