Stem-loop ggo-mir-1277

Accession

MI0020722

Description

Gorilla gorilla ggo-mir-1277 precursor miRNA

Sequence

175 reads, 13.0 reads per million, 4 experiments

gcagaaaugcaguauccauuucuaaccucccaaaUAUAUAUAUAUAUGUACGUAUGuguauauaaauguaUACGUAGAUAUAUAUGUAUUUUugguggguuuaauuuu
..(((((((.......)))))))(((((.(((((.((((((((((((.(((((((((((......))))))))))).)))))))))))).))))).))))).......

Structure

gcagaaaugcaguauccauuucu     c     U            G           au 
                       aaccu ccaaa AUAUAUAUAUAU UACGUAUGugu  a
                       ||||| ||||| |||||||||||| |||||||||||   
                       uuggg gguUU UAUGUAUAUAUA AUGCAUaugua  u
----------------uuuuaau     u     U            G           aa 

Annotation confidence High

Genome context

chrX: 118246741-118246848 [+]

Mature ggo-miR-1277-5p

• Accession: MIMAT0061330
• Description: Gorilla gorilla ggo-miR-1277-5p mature miRNA
• Sequence: 35 - UAUAUAUAUAUAUGUACGUAUG - 56
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-1277-3p

• Accession: MIMAT0024175
• Description: Gorilla gorilla ggo-miR-1277-3p mature miRNA
• Sequence: 71 - UACGUAGAUAUAUAUGUAUUUU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116