Stem-loop ggo-mir-142

Accession

MI0020724

Description

Gorilla gorilla ggo-mir-142 precursor miRNA

Sequence

acagacagacagugcagucaCCCAUAAAGUAGAAAGCACUAcuaacagcacuggaggguguaguguuuccuacuuuauggaugaguguacugugggcuucggagaucacgc
..((.(..((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).))))))))..))).............

Structure

-----------ac  a ag        g   C           A         uaa ag a 
             ag c  acagugca uca CCAUAAAGUAG AAGCACUAc   c  c c
             || |  |||||||| ||| ||||||||||| |||||||||   |  |  
             uc g  ugucaugu agu gguauuucauc uuugugaug   g  g u
cgcacuagaggcu  - gg        g   a           c         -ug ga g 

Annotation confidence Low

Genome context

chr5: 25044891-25045001 [+]

Mature ggo-miR-142

• Accession: MIMAT0024177
• Description: Gorilla gorilla ggo-miR-142 mature miRNA
• Sequence: 21 - CCCAUAAAGUAGAAAGCACUA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116