miRBase entry: ggo-mir-329b

Stem-loop ggo-mir-329b

Accession

MI0020725

Description

Gorilla gorilla ggo-mir-329b precursor miRNA

Sequence

uucuugucaguguuacuuggugguaccugaagagagguuuucuggguuucuguuucuuuauugaggaugaAACACACCUGGUUAACCUCUuuuccaguaucagucccc
..................((((((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..))))))..))..

Structure

uucuugucaguguuacuu  --      cu           uu      uuc      u  au 
                  gg  ugguac  gaagagagguu  cugggu   uguuuc uu  u
                  ||  ||||||  |||||||||||  ||||||   |||||| ||   
                  cc  acuaug  cuuuUCUCCAA  GGUCCA   ACAAag ag  g
----------------cc  ug      ac           UU      --C      u  ga

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 85050414-85050521 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ggo-mir-329b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-329b

Accession	MIMAT0024178
Description	Gorilla gorilla ggo-miR-329b mature miRNA
Sequence	71 - AACACACCUGGUUAACCUCU - 90
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116