Stem-loop ggo-mir-329b

Accession

MI0020725

Description

Gorilla gorilla ggo-mir-329b precursor miRNA

Sequence

415 reads, 32.0 reads per million, 4 experiments

uucuugucaguguuacuuggugguaccugaagAGAGGUUUUCUGGGUUUCUGUUUcuuuauugaggaugaAACACACCUGGUUAACCUCUUuuccaguaucagucccc
..................((((((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..))))))..))..

Structure

uucuugucaguguuacuu  --      cu           UU      UUC      u  au 
                  gg  ugguac  gaagAGAGGUU  CUGGGU   UGUUUc uu  u
                  ||  ||||||  |||||||||||  ||||||   |||||| ||   
                  cc  acuaug  cuuUUCUCCAA  GGUCCA   ACAAag ag  g
----------------cc  ug      ac           UU      --C      u  ga 

Annotation confidence High

Genome context

chr14: 85050414-85050521 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ggo-mir-329b

Mature ggo-miR-329b-5p

• Accession: MIMAT0061332
• Description: Gorilla gorilla ggo-miR-329b-5p mature miRNA
• Sequence: 33 - AGAGGUUUUCUGGGUUUCUGUUU - 55
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-329b-3p

• Accession: MIMAT0024178
• Description: Gorilla gorilla ggo-miR-329b-3p mature miRNA
• Sequence: 71 - AACACACCUGGUUAACCUCUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116