miRBase entry: ggo-mir-502a

Stem-loop ggo-mir-502a

Accession

MI0020734

Description

Gorilla gorilla ggo-mir-502a precursor miRNA

Sequence

gugcccaagccuucugcccugcucccccucucuaauccuugcuaucugggugcuagugcugucucaaugcAAUGCACCUGGGCAAGGAUUCAgagagggggagcucaacugu
....................((((((((((((((((((((((...((((((((...(((.........)))..))))))))))))))))).)))))))))))))........

Structure

gugcccaagccuucugcccu             -         uau        uag   ugu 
                    gcucccccucucu aauccuugc   cugggugc   ugc   c
                    ||||||||||||| |||||||||   ||||||||   |||   u
                    cgagggggagagA UUAGGAACG   GGUCCACG   Acg   c
------------ugucaacu             C         ---        -UA   uaa

Annotation confidence Not enough data

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Genome context

chrX: 50448538-50448649 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-502a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-502a

Accession	MIMAT0024187
Description	Gorilla gorilla ggo-miR-502a mature miRNA
Sequence	71 - AAUGCACCUGGGCAAGGAUUCA - 92
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116