miRBase entry: ggo-mir-377

Stem-loop ggo-mir-377


Accession
MI0020748
Description
Gorilla gorilla ggo-mir-377 precursor miRNA


Sequence

143 reads, 11.0 reads per million, 4 experiments
uucuugcccgugcugauguuugacccuugagcAGAGGUUGCCCUUGGUGAAUUCgcuuuauuuauguugaAUCACACAAAGGCAACUUUUGUuugaguaucaaauccug
.................((((((..(((((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))))))..))))))....

Structure
uucuugcccgugcugau      cc                 C   -    A    - uuu 
                 guuuga  cuugagcAGAGGUUGCC UUG GUGA UUCg c   a
                 ||||||  ||||||||||||||||| ||| |||| |||| |   u
                 uaaacu  gaguuUGUUUUCAACGG AAC CACU Aagu g   u
-------------gucc      au                 A   A    -    u uau 


Annotation confidence High
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Genome context
chr14: 85085083-85085191 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from ggo-mir-377
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-377-5p

Accession MIMAT0061339
Description Gorilla gorilla ggo-miR-377-5p mature miRNA
Sequence 33 - AGAGGUUGCCCUUGGUGAAUUC - 54
Evidence experimental
Illumina [1]

Mature ggo-miR-377-3p

Accession MIMAT0024201
Description Gorilla gorilla ggo-miR-377-3p mature miRNA
Sequence 71 - AUCACACAAAGGCAACUUUUGU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116