miRBase entry: ggo-mir-1179

Stem-loop ggo-mir-1179

Accession

MI0020765

Description

Gorilla gorilla ggo-mir-1179 precursor miRNA

Sequence

cuuauuggcuggaaaggaagAAGCAUUCUUUCAUUGGUUGGuguguauugccuugucaaccaauaagaggaugccauuuauccuuuucugacuagcugagugagcagggua
((((((((((((((((((.((((((((((((.(((((((((...(......)...))))))))).)))))))))..))).)))))).....)))))).)))))).......

Structure

-------      -      -----      a   --         C         ugu ua 
       cuuauu ggcugg     aaagga gAA  GCAUUCUUU AUUGGUUGG   g  u
       |||||| ||||||     |||||| |||  ||||||||| |||||||||   |   
       gaguga ucgauc     uuuccu uuu  cguaggaga uaaccaacu   c  u
augggac      g      agucu      a   ac         a         guu cg

Annotation confidence Not enough data

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Genome context

chr15: 67207528-67207638 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-1179

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-1179

Accession	MIMAT0024218
Description	Gorilla gorilla ggo-miR-1179 mature miRNA
Sequence	21 - AAGCAUUCUUUCAUUGGUUGG - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116