Stem-loop ggo-mir-144

Accession

MI0020766

Description

Gorilla gorilla ggo-mir-144 precursor miRNA

Literature search

1 open access papers mention ggo-mir-144
(2 sentences)

Sequence

460 reads, 31.0 reads per million, 4 experiments

ccccaguggggcccuggcugGGAUAUCAUCAUAUACUGUAAGUuugcgaugagacacUACAGUAUAGAUGAUGUACUaguccgggcacccccagcucuggagccugacaag
..(((((((((.(((((((((.((((((((.(((((((((.((((......))))..))))))))))))))))).)))).)))))...)))))...))))...........

Structure

---------cc    ---     --c     -    G        A         -A    gc 
           ccag   ugggg   ccugg cugG AUAUCAUC UAUACUGUA  GUuu  g
           ||||   |||||   ||||| |||| |||||||| |||||||||  ||||   
           gguc   acccc   gggcc gaUC UGUAGUAG AUAUGACAU  caga  a
gaacaguccga    ucg     cac     u    A        -         ca    gu 

Annotation confidence High

Genome context

chr5: 54634286-54634396 [+]

Mature ggo-miR-144-5p

• Accession: MIMAT0024219
• Description: Gorilla gorilla ggo-miR-144-5p mature miRNA
• Sequence: 21 - GGAUAUCAUCAUAUACUGUAAGU - 43
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-144-3p

• Accession: MIMAT0061343
• Description: Gorilla gorilla ggo-miR-144-3p mature miRNA
• Sequence: 58 - UACAGUAUAGAUGAUGUACU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116