Stem-loop ggo-mir-455

Accession

MI0020769

Description

Gorilla gorilla ggo-mir-455 precursor miRNA

Literature search

1 open access papers mention ggo-mir-455
(1 sentences)

Sequence

2329 reads, 137.0 reads per million, 4 experiments

gcgagcgccugcgcccuucccuggcgugagggUAUGUGCCUUUGGACUACAUCGuggaagccagcaccauGCAGUCCAUGGGCAUAUACACuugccucaaggccuauguc
(((((.(((((((((.......)))))((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))).)))))).))).

Structure

-   -  c    gcgcccuucccuggcgu    -----          U      A   C   gaa 
 gcg ag gccu                 gagg     gUAUGUGCCU UGGACU CAU Gug   g
 ||| || ||||                 ||||     |||||||||| |||||| ||| |||    
 ugu uc cgga                 cucc     CAUAUACGGG ACCUGA Gua cac   c
c   a  -    ----------------a    guuCA          U      C   c   gac 

Annotation confidence High

Genome context

chr9: 96780928-96781037 [+]

Mature ggo-miR-455-5p

• Accession: MIMAT0061345
• Description: Gorilla gorilla ggo-miR-455-5p mature miRNA
• Sequence: 33 - UAUGUGCCUUUGGACUACAUCG - 54
• Evidence: experimental ; Illumina [1]

Mature ggo-miR-455-3p

• Accession: MIMAT0024222
• Description: Gorilla gorilla ggo-miR-455-3p mature miRNA
• Sequence: 71 - GCAGUCCAUGGGCAUAUACAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116