miRBase entry: ggo-mir-496

Stem-loop ggo-mir-496

Accession

MI0020770

Description

Gorilla gorilla ggo-mir-496 precursor miRNA

Sequence

cgcuggaagcgagcacccaagucagguacucgaauggagguuguccaugguguguucauuuuauuuaugaUGAGUAUUACAUGGCCAAUCuccuuucgguacucaguucu
((((...)))).............(((((.((((.((((((((.(((((..(((((((((........)))))))))..))))).)))))))).))))))))).......

Structure

cgcuggaagcgagcacccaaguca     u    u        u     gu         uua 
                        gguac cgaa ggagguug ccaug  guguucauu   u
                        ||||| |||| |||||||| |||||  |||||||||    
                        ucaug gcuu ccuCUAAC GGUAC  UAUGAGUag   u
-----------------ucuugac     -    u        C     AU         uau

Annotation confidence Not enough data

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Genome context

chr14: 85083613-85083722 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from ggo-mir-496

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-496

Accession	MIMAT0024223
Description	Gorilla gorilla ggo-miR-496 mature miRNA
Sequence	71 - UGAGUAUUACAUGGCCAAUC - 90
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116