Stem-loop ggo-mir-1228

Accession

MI0020776

Description

Gorilla gorilla ggo-mir-1228 precursor miRNA

Sequence

ugaugagcgugacugcccagGUGGGCGGGGGCAGGUGUGUGGugggugguggccugcggugagcagggcccucacaccugccucgccccccaggugugaaacgccccagau
......((((..(((((..((.((((((((.((((((((.((........(.(((((.....))))).))).))))))))))))))))))..)))).)..)))).......

Structure

-ugauga    ga -    ca  U        G        U  uggguggu g     g 
       gcgu  c ugcc  gG GGGCGGGG CAGGUGUG GG        g ccugc g
       ||||  | ||||  || |||||||| |||||||| ||        | ||||| u
       cgca  g gugg  cc cccgcucc guccacac cc        c ggacg g
uagaccc    aa u    ac  -        -        u  -------- g     a 

Annotation confidence Not enough data

Genome context

chr12: 28919301-28919411 [+]

Mature ggo-miR-1228

• Accession: MIMAT0024229
• Description: Gorilla gorilla ggo-miR-1228 mature miRNA
• Sequence: 21 - GUGGGCGGGGGCAGGUGUGUGG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116