miRBase entry: ggo-mir-1298

Stem-loop ggo-mir-1298


Accession
MI0020779
Description
Gorilla gorilla ggo-mir-1298 precursor miRNA


Sequence

gagagacgaggaguuaagagUUCAUUCGGCUGUCCAGAUGuauccaaguacccuguguuauuuggcaauaaauacaucugggcaacugacugaacuuuucacuuuucaug
.......(((((((.(((((((((.((((.((((((((((((((((((((........)))))))......))))))))))))).)))).))))))))).)))))))...

Structure
gagagac       u         U    C             ------       ccc 
       gaggagu aagagUUCA UCGG UGUCCAGAUGuau      ccaagua   u
       ||||||| ||||||||| |||| |||||||||||||      |||||||    
       cuuuuca uuuucaagu aguc acgggucuacaua      gguuuau   g
----gua       c         c    a             aauaac       ugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 114739007-114739116 [+]

Database links

Mature ggo-miR-1298

Accession MIMAT0024232
Description Gorilla gorilla ggo-miR-1298 mature miRNA
Sequence 21 - UUCAUUCGGCUGUCCAGAUG - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116