Stem-loop ggo-mir-1197

Accession

MI0020792

Description

Gorilla gorilla ggo-mir-1197 precursor miRNA

Sequence

caggggucagcgucacuuccugguauuugaagaugcgguugaccaugguguguacgcuuuauuugugacgUAGGACACAUGGUCUACUUCuucucaauaucacaucucgc
..(((((.......))))).(((((((.(((((...(((.(((((((.(((.(((((.........).))))..)))))))))).))))))))..)))))))........

Structure

caggggucagcgucacuucc       -u     ugc   u       g   -g    - uuu 
                    ugguauu  gaaga   ggu gaccaug ugu  uacg c   a
                    |||||||  |||||   ||| ||||||| |||  |||| |   u
                    acuauaa  cuuCU   UCA CUGGUAC ACA  AUgc g   u
------------cgcucuac       cu     ---   U       -   GG    a ugu 

Annotation confidence Not enough data

Genome context

chr14: 85048882-85048991 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ggo-mir-1197

Mature ggo-miR-1197

• Accession: MIMAT0024245
• Description: Gorilla gorilla ggo-miR-1197 mature miRNA
• Sequence: 71 - UAGGACACAUGGUCUACUUC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116