miRBase entry: ggo-mir-493

Stem-loop ggo-mir-493

Accession

MI0020797

Description

Gorilla gorilla ggo-mir-493 precursor miRNA

Sequence

ucauucuggccuccagggcuUUGUACAUGGUAGGCUUUCAUucauucguuugcacauucggugaaggucuacugugugccaggcccugugccaggcaucguguagaugga
....((((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).))))))((((.....))))..

Structure

-----------ucau      cuc        U                    cauucgu 
               ucuggc   cagggcuU GUACAUGGUAGGCUUUCAUu       u
               ||||||   |||||||| ||||||||||||||||||||       u
               ggaccg   gucccgga cgugugucaucuggaagugg       g
agguagaugugcuac      --u        c                    cuuacac

Annotation confidence Not enough data

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Genome context

chr14: 84887397-84887506 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-493

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-493

Accession	MIMAT0024249
Description	Gorilla gorilla ggo-miR-493 mature miRNA
Sequence	21 - UUGUACAUGGUAGGCUUUCAU - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116