miRBase entry: ggo-mir-668

Stem-loop ggo-mir-668

Accession

MI0020800

Description

Gorilla gorilla ggo-mir-668 precursor miRNA

Sequence

agaaggcagugcccucagcacucccuuaagguaagugcgccucgggugagcaugcacuuaauguggguguAUGUCACUCGGCUCGGCCCACuacccaauacuaucccaccc
..((((.(((((.....))))).))))..((((.(((.(((((((((((.((((((((((...))))))))))))))))))...))).)))))))................

Structure

agaaggcagugcccucagcacucccuuaa    a   c   ---        g          a 
                             ggua gug gcc   ucggguga caugcacuua  
                             |||| ||| |||   |||||||| |||||||||| u
                             ccau CAC CGG   GGCUCACU GUAugugggu  
-------------cccacccuaucauaac    -   C   CUC        -          g

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 85078261-85078371 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ggo-mir-668

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-668

Accession	MIMAT0024252
Description	Gorilla gorilla ggo-miR-668 mature miRNA
Sequence	71 - AUGUCACUCGGCUCGGCCCAC - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116