miRBase entry: ggo-mir-517c

Stem-loop ggo-mir-517c

Accession

MI0020802

Description

Gorilla gorilla ggo-mir-517c precursor miRNA

Sequence

ugucaaaaaaaagaagaccucaggcugugacccucuagauggaagcacugucuguuguguaaaagaaaagAUCGUGCAUCCCUUUAGAGUGuuacuguuugagaaaagcaa
.(((...........)))(((((((.(((((.(((((((.(((.((((.((((.((.(.....).)).)))).)))).))).))))))).))))).)))))))........

Structure

ugucaaaaaaaagaagac       u     c       u   a    u    g  g g 
                  cucaggc gugac cucuaga gga gcac gucu uu u u
                  ||||||| ||||| ||||||| ||| |||| |||| || | a
                  gaguuug cauuG GAGAUUU CCU CGUG UAga aa a a
----------aacgaaaa       u     U       C   A    C    a  g a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr19: 53054731-53054841 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-517c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-517c

Accession	MIMAT0024254
Description	Gorilla gorilla ggo-miR-517c mature miRNA
Sequence	71 - AUCGUGCAUCCCUUUAGAGUG - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116