miRBase entry: ggo-mir-182

Stem-loop ggo-mir-182

Accession

MI0020846

Description

Gorilla gorilla ggo-mir-182 precursor miRNA

Sequence

gcugcuugccucccccuguuUUUGGCAAUGGUAGAACUCACAcuggugagguaacaggauccggugguucuagacuugccaacuauggggcgaggacucagccggcacccug
((((((.(((((.((((((..(((((((...((((((...((((((..............))))))))))))...)))))))..)))))).)))).)..)).))))......

Structure

------    -  -u -    c      uU       UGG      UCA      ugaggu 
      gcug cu  g ccuc cccugu  UUGGCAA   UAGAAC   CAcugg      a
      |||| ||  | |||| ||||||  |||||||   ||||||   ||||||       
      cggc ga  c ggag ggggua  aaccguu   aucuug   guggcc      a
guccca    c  cu a    c      uc       cag      ---      uaggac

Annotation confidence Not enough data

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Genome context

chr7: 129144109-129144220 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ggo-mir-182

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-182

Accession	MIMAT0024298
Description	Gorilla gorilla ggo-miR-182 mature miRNA
Sequence	21 - UUUGGCAAUGGUAGAACUCACA - 42
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116