Stem-loop mml-mir-873

Accession

MI0020859

Description

Macaca mulatta mml-mir-873 precursor miRNA mir-873

Gene
family

RF00910; mir-873

Sequence

3047 reads, 20 reads per million, 8 experiments

gaauaaguuugugugcauuuGCAGGAACUUGUGAGUCUCCuauugaaaaugaacaggAGACUGAUGAGUUCCCGGGAacacccacaaaucuuccuacucauuucuacugc
(((...(((((((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).))))))).))).................

Structure

-----------------   uaa       u ca   G A         G        a  ga 
                 gaa   guuugug g  uuu C GGAACUUGU AGUCUCCu uu  a
                 |||   ||||||| |  ||| | ||||||||| |||||||| ||  a
                 cuu   uaaacac c  aAG G CCUUGAGUA UCAGAgga aa  a
cgucaucuuuacucauc   --c       c ac   G C         G        c  gu 

Annotation confidence Medium

Genome context

chr15: 54963981-54964090 [+]

Mature mml-miR-873-5p

• Accession: MIMAT0024311
• Description: Macaca mulatta mml-miR-873-5p mature miRNA
• Sequence: 21 - GCAGGAACUUGUGAGUCUCC - 40
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-873-3p

• Accession: MIMAT0027106
• Description: Macaca mulatta mml-miR-873-3p mature miRNA
• Sequence: 58 - AGACUGAUGAGUUCCCGGGA - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45