Stem-loop mml-mir-1185-1

Accession

MI0020862

Description

Macaca mulatta mml-mir-1185-1 precursor miRNA

Sequence

2228 reads, 16 reads per million, 8 experiments

ccgcucuuugguacuugaagAGAGGAUACCCUUUGUAUGUUcacuugauuaauggugaaUAUACAGGGGGAGACUCUUAuuugcguaucaaacucugucggggaaggcgc
.((((.((((((((.(((((((((..(.(((((((((((((((((........))))))))))))))))))..))))).)))).))))))))(((....)))...)))).

Structure

c    ------------c        u    -     GA A                 uga 
 cgcu             uuugguac ugaa gAGAG  U CCCUUUGUAUGUUcacu   u
 ||||             |||||||| |||| |||||  | |||||||||||||||||    
 gcgg             aaacuaug guuu UUCUC  A GGGGGACAUAUaagugg   u
c    aaggggcugucuc        c    A     AG -                 uaa 

Annotation confidence Medium

Genome context

chr7: 163378194-163378303 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mml-mir-1185-1

Mature mml-miR-1185-5p

• Accession: MIMAT0024314
• Description: Macaca mulatta mml-miR-1185-5p mature miRNA
• Sequence: 21 - AGAGGAUACCCUUUGUAUGUU - 41
• Evidence: experimental ; Illumina [1]

Mature mml-miR-1185-3p

• Accession: MIMAT0027107
• Description: Macaca mulatta mml-miR-1185-3p mature miRNA
• Sequence: 60 - UAUACAGGGGGAGACUCUUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45