Stem-loop mml-mir-1298

Accession

MI0020864

Description

Macaca mulatta mml-mir-1298 precursor miRNA

Literature search

1 open access papers mention mml-mir-1298
(1 sentences)

Sequence

1650 reads, 12 reads per million, 8 experiments

gagagacgaggaguuaagagUUCAUUCGGCUGUCCAGAUGUAuccaaguauccucuguuauuuggcaauaaauaCAUCUGGGCAACUGACUGAACUuuucgcuuuucaug
.......(((((((.(((((((((.((((.((((((((((((((((((((........)))))))......))))))))))))).)))).))))))))).)))))))...

Structure

gagagac       u         U    C             ------       ucc 
       gaggagu aagagUUCA UCGG UGUCCAGAUGUAu      ccaagua   u
       ||||||| ||||||||| |||| |||||||||||||      |||||||    
       cuuuucg uuuUCAAGU AGUC ACGGGUCUACaua      gguuuau   c
----gua       c         C    A             aauaac       ugu 

Annotation confidence Medium

Genome context

chrX: 108589563-108589672 [+]

Mature mml-miR-1298-5p

• Accession: MIMAT0024316
• Description: Macaca mulatta mml-miR-1298-5p mature miRNA
• Sequence: 21 - UUCAUUCGGCUGUCCAGAUGUA - 42
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-1298-3p

• Accession: MIMAT0027109
• Description: Macaca mulatta mml-miR-1298-3p mature miRNA
• Sequence: 75 - CAUCUGGGCAACUGACUGAACU - 96
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45