Stem-loop mml-mir-3200

Accession

MI0020871

Description

Macaca mulatta mml-mir-3200 precursor miRNA

Sequence

970 reads, 8 reads per million, 7 experiments

agagagacaaagaaggagguggucgaggGAAUCUGAGAAGGCGCACAAGGUUUGUGuccaauacaguccaCACCUUGCGCUACUCAGGUCUGcucgugcccucccaugau
..............(((((.(..((((.(.(((((((..((((((..((((((((((...)))))).....)))))))))).))))))).).))))..))))))......

Structure

agagagacaaagaa     u gu    g A       AA      CA    -----      c 
              ggagg g  cgag G AUCUGAG  GGCGCA  AGGU     UUGUGu  
              ||||| |  |||| | |||||||  ||||||  ||||     |||||| c
              ccucc c  gcuc U UGGACUC  UCGCGU  UCCA     gacaua  
--------uaguac     - gu    G C       -A      --    Caccu      a 

Annotation confidence Medium

Genome context

chr10: 72589387-72589496 [+]

Mature mml-miR-3200-3p

• Accession: MIMAT0024323
• Description: Macaca mulatta mml-miR-3200-3p mature miRNA
• Sequence: 71 - CACCUUGCGCUACUCAGGUCUG - 92
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-3200-5p

• Accession: MIMAT0027112
• Description: Macaca mulatta mml-miR-3200-5p mature miRNA
• Sequence: 29 - GAAUCUGAGAAGGCGCACAAGGUUUGUG - 56
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45