Stem-loop mml-mir-1179

Accession

MI0020877

Description

Macaca mulatta mml-mir-1179 precursor miRNA

Sequence

301 reads, 5 reads per million, 5 experiments

cuuauuggcuggaaaggaagAAGCAUUCUUUCAUUGGUUGGuguguauugccuugucaaccaauaagaggaugccauuuauccuuuucugacuagcugagugagcagggug
((((((((((((((((((.((((((((((((.(((((((((...(......)...))))))))).)))))))))..))).)))))).....)))))).)))))).......

Structure

-------      -      -----      a   --         C         ugu ua 
       cuuauu ggcugg     aaagga gAA  GCAUUCUUU AUUGGUUGG   g  u
       |||||| ||||||     |||||| |||  ||||||||| |||||||||   |   
       gaguga ucgauc     uuuccu uuu  cguaggaga uaaccaacu   c  u
gugggac      g      agucu      a   ac         a         guu cg 

Annotation confidence Not enough data

Genome context

chr7: 66597137-66597247 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-1179

Mature mml-miR-1179

• Accession: MIMAT0024329
• Description: Macaca mulatta mml-miR-1179 mature miRNA
• Sequence: 21 - AAGCAUUCUUUCAUUGGUUGG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116