miRBase entry: mml-mir-1250

Stem-loop mml-mir-1250

Accession

MI0020882

Description

Macaca mulatta mml-mir-1250 precursor miRNA

Sequence

ucucgcuggccuggaaggugACGGUGCUGAAUGUGGCCUUuuugccuuuuccaaaggccacauuuuccagcccauucacccuuccagagcccucugagguggccuaggcc
(((((..((((((((((((((.((.((((((((((((((((...........))))))))))))...))))))..))).)))))))).)))...))))).(((....)))

Structure

-----------     -cu   -        -   -C  U    ---            uugc 
           ucucg   ggc cuggaagg ugA  GG GCUG   AAUGUGGCCUUu    c
           |||||   ||| |||||||| |||  || ||||   ||||||||||||    u
           ggagu   ccg gaccuucc acu  cc cgac   uuacaccggaaa    u
ccggauccggu     cuc   a        c   ua  -    cuu            ccuu

Annotation confidence Not enough data

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Genome context

chr16: 74994245-74994354 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-1250

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-1250

Accession	MIMAT0024334
Description	Macaca mulatta mml-miR-1250 mature miRNA
Sequence	21 - ACGGUGCUGAAUGUGGCCUU - 40
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116