Stem-loop mml-mir-1243

Accession

MI0020886

Description

Macaca mulatta mml-mir-1243 precursor miRNA

Sequence

1938 reads, 4.0 reads per million, 74 experiments

cugacagauugguugacuguguacucuuauauuuuauUCCUGUAACUGGGCCAGUUUCUgcccuuaacuaAAACUGGAUCAAUUAUAGGAGUgaaauaaaaguccaucucc
...((((.........)))).....(((.((((((((((((((((.((..(((((((..(.......)..)))))))..)).)))))))))))))))).))).........

Structure

cugacagauugguugacuguguacu   a                C  GG       CU cc 
                         cuu uauuuuauUCCUGUAA UG  CCAGUUU  g  c
                         ||| |||||||||||||||| ||  |||||||  |  u
                         gaa auaaagUGAGGAUAUU AC  GGUCAAA  c  u
----------------ccucuaccu   a                A  UA       au aa 

Annotation confidence High

Genome context

5: 111404827-111404937 [+]

Mature mml-miR-1243-5p

• Accession: MIMAT0027116
• Description: Macaca mulatta mml-miR-1243-5p mature miRNA
• Sequence: 38 - UCCUGUAACUGGGCCAGUUUCU - 59
• Evidence: experimental ; Illumina [2]

Mature mml-miR-1243-3p

• Accession: MIMAT0024338
• Description: Macaca mulatta mml-miR-1243-3p mature miRNA
• Sequence: 71 - AAACUGGAUCAAUUAUAGGAGU - 92
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45