Stem-loop mml-mir-1323

Accession

MI0020894

Description

Macaca mulatta mml-mir-1323 precursor miRNA

Literature search

1 open access papers mention mml-mir-1323
(3 sentences)

Sequence

498 reads, 114 reads per million, 2 experiments

ugacauucagacugauguccUCAAAACUGAGGGGCAUUUUCugugauuugaaaggAAAGUGCACCCAGUUUUGGGGaugucaauugugaauacucaucauaacccauu
(((.(((((.(.(((((((((((((((((.((.(((((((((...........))))))))).)))))))))))))))))))..).)))))..)))............

Structure

------------   -c     g -c                 A  G         guga 
            uga  auuca a  ugauguccUCAAAACUG GG GCAUUUUCu    u
            |||  ||||| |  ||||||||||||||||| || |||||||||    u
            acu  uaagu u  acuguaGGGGUUUUGAC CC CGUGAAAgg    u
uuacccaauacu   ca     g ua                 -  A         aaag 

Annotation confidence Low

Genome context

chr19: 49019624-49019731 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mml-mir-1323

Mature mml-miR-1323-5p

• Accession: MIMAT0024346
• Description: Macaca mulatta mml-miR-1323-5p mature miRNA
• Sequence: 21 - UCAAAACUGAGGGGCAUUUUC - 41
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-1323-3p

• Accession: MIMAT0027118
• Description: Macaca mulatta mml-miR-1323-3p mature miRNA
• Sequence: 56 - AAAGUGCACCCAGUUUUGGGG - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45