Stem-loop mml-mir-514b

Accession

MI0020896

Description

Macaca mulatta mml-mir-514b precursor miRNA

Literature search

1 open access papers mention mml-mir-514b
(1 sentences)

Sequence

6162 reads, 277 reads per million, 8 experiments

auccuuaaauguucuauuccucaugugguacucUUCUCAAGAGGGAGGCAAUCAuguguaauuagauaugAUUGACACCUCUGUGAGUAGAguaacacaugguauuuccau
....................(((((((.((((((.(((((((((....(((((((((........)))))))))...))))).)))).)))))).))))))).........

Structure

auccuuaaauguucuauucc       g      U    -     GAGG         gua 
                    ucaugug uacucU CUCA AGAGG    CAAUCAugu   a
                    ||||||| |||||| |||| |||||    |||||||||    
                    gguacac augAGA GAGU UCUCC    GUUAguaua   u
-----------uaccuuuau       a      U    G     -ACA         gau 

Annotation confidence Medium

Genome context

chrX: 140957046-140957156 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from mml-mir-514b

Mature mml-miR-514b-3p

• Accession: MIMAT0024348
• Description: Macaca mulatta mml-miR-514b-3p mature miRNA
• Sequence: 71 - AUUGACACCUCUGUGAGUAGA - 91
• Evidence: experimental ; Illumina [1-2]

Mature mml-miR-514b-5p

• Accession: MIMAT0027119
• Description: Macaca mulatta mml-miR-514b-5p mature miRNA
• Sequence: 34 - UUCUCAAGAGGGAGGCAAUCA - 54
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45