miRBase entry: mml-mir-517c

Stem-loop mml-mir-517c


Accession
MI0020899
Description
Macaca mulatta mml-mir-517c precursor miRNA


Sequence

905096 reads, 11437.0 reads per million, 66 experiments
uauuggagcgagaagaucuccucaugcagugacACUCUAAAUGGCAGCACUGUCUGuggucuaaaacaagAUCGUGCAGCCUUUUAGAGUGUUacugugugagaaaagcaa
.........((((...))))(((((((((((((((((((((.(((.((((.((((((........)).)))).)))).))).)))))))))))))))))))))........

Structure
uauuggagcgagaagaucuc                     U   A    U    -  ggu 
                    cucaugcagugacACUCUAAA GGC GCAC GUCU Gu   c
                    ||||||||||||||||||||| ||| |||| |||| ||    
                    gagugugucaUUGUGAGAUUU CCG CGUG UAga ca   u
------------aacgaaaa                     U   A    C    a  aaa 


Annotation confidence High
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Genome context
19: 53509445-53509555 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from mml-mir-517c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-517c-5p

Accession MIMAT0051689
Description Macaca mulatta mml-miR-517c-5p mature miRNA
Sequence 34 - ACUCUAAAUGGCAGCACUGUCUG - 56
Evidence experimental
Illumina [1]

Mature mml-miR-517c-3p

Accession MIMAT0024351
Description Macaca mulatta mml-miR-517c-3p mature miRNA
Sequence 71 - AUCGUGCAGCCUUUUAGAGUGUU - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116