Stem-loop mml-mir-519e

Accession

MI0020901

Description

Macaca mulatta mml-mir-519e precursor miRNA

Literature search

1 open access papers mention mml-mir-519e
(1 sentences)

Sequence

4524189 reads, 56934.0 reads per million, 62 experiments

gagaagaucucaugcagucaUUCUCCAAUGGGAAGCACCUUCUGUggucugaaagcaagcaGAGGGCCUCCUUUUGGAGCAUUacuguuugagaguaaccacgucgaagu
.......(((((.(((((.((.((((((.((((.((.(((.((((.((......))..))))))))).)))).)))))).)).))))).)))))................

Structure

---------gagaaga     u     c  U      U    A  A   U    -g  cu 
                ucuca gcagu aU CUCCAA GGGA GC CCU CUGU  gu  g
                ||||| ||||| || |||||| |||| || ||| ||||  ||   
                agagu uguca UA GAGGUU UCCU CG GGA Gacg  cg  a
ugaagcugcaccaaug     u     U  C      U    C  -   -    aa  aa 

Annotation confidence High

Genome context

19: 53442708-53442817 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from mml-mir-519e

Mature mml-miR-519e-5p

• Accession: MIMAT0024353
• Description: Macaca mulatta mml-miR-519e-5p mature miRNA
• Sequence: 21 - UUCUCCAAUGGGAAGCACCUUCUGU - 45
• Evidence: experimental ; Illumina [1]

Mature mml-miR-519e-3p

• Accession: MIMAT0051691
• Description: Macaca mulatta mml-miR-519e-3p mature miRNA
• Sequence: 62 - GAGGGCCUCCUUUUGGAGCAUU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116