Stem-loop ppy-mir-4446

Accession

MI0020905

Description

Pongo pygmaeus ppy-mir-4446 precursor miRNA

Sequence

uacuucaggauugaugaguccaguggcucugguccauuucccugccauucccuuggcuucaauuuacuccCAGGGCUGGCAGUGAGAUGGGucaaggcucacaccuucacc
.......(((((....))))).((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).))).))).........

Structure

uacuucaggauugaugagucca   -   c           c      uuc      cuuca 
                      gug gcu ugguccauuuc cugcca   ccuugg     a
                      ||| ||| ||||||||||| ||||||   ||||||     u
                      cac cgg acuGGGUAGAG GACGGU   GGGACc     u
-------------ccacuucca   u   a           U      --C      cucau 

Annotation confidence Not enough data

Genome context

chr3: 19245244-19245354 [-]

Mature ppy-miR-4446

• Accession: MIMAT0024357
• Description: Pongo pygmaeus ppy-miR-4446 mature miRNA
• Sequence: 71 - CAGGGCUGGCAGUGAGAUGGG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116