Stem-loop ppy-mir-202

Accession

MI0020907

Description

Pongo pygmaeus ppy-mir-202 precursor miRNA

Sequence

gagccgcccgccguuccuuuUUCCUAUGCAUAUACUUCUUugaggaucuggccuaaagagguauagggcaugggaaaacggggcggucggguccuccccagcagcaccug
(((..((((((((((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).))))))).))))).)))..............

Structure

--------------   cc     -       u           -A           g   au 
              gag  gcccg ccguucc uuUUCCUAUGC  UAUACUUCUUu agg  c
              |||  ||||| ||||||| |||||||||||  ||||||||||| |||   
              cuc  ugggc ggcgggg aaaaggguacg  auauggagaaa ucc  u
guccacgacgaccc   -c     u       c           gg           -   gg 

Annotation confidence Not enough data

Genome context

chr10: 132960274-132960383 [-]

Mature ppy-miR-202

• Accession: MIMAT0024359
• Description: Pongo pygmaeus ppy-miR-202 mature miRNA
• Sequence: 21 - UUCCUAUGCAUAUACUUCUU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116