Stem-loop ppy-mir-378b

Accession

MI0020912

Description

Pongo pygmaeus ppy-mir-378b precursor miRNA

Sequence

gccucaguuuccuccacugaagaaugggaggaggcuggucauugagucuucaaggcuaguggaaagagcACUGGACUUGGAGGCAGAAAGacccaacuugcguccuggc
(((.(((((((((((.(........))))))))))))(((.((..(((((((((.((((((.......)))))).)))))))))..)).)))..............)))

Structure

   ucaguuuccuccacugaagaaugggaggaggcug   a  ga         g      ga 
gcc                                  guc uu  gucuucaag cuagug  a
|||                                  ||| ||  ||||||||| ||||||  a
cgg                                  caG AA  CGGAGGUUC GGUCAc  g
   --------------------uccugcguucaacc   A  GA         A      ga 

Annotation confidence Not enough data

Genome context

chr3: 59587304-59587412 [-]

Mature ppy-miR-378b

• Accession: MIMAT0024364
• Description: Pongo pygmaeus ppy-miR-378b mature miRNA
• Sequence: 70 - ACUGGACUUGGAGGCAGAAAG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116