Stem-loop ppy-mir-454

Accession

MI0020915

Description

Pongo pygmaeus ppy-mir-454 precursor miRNA

Sequence

aaaaaauucuguuugucaccagauccuagaacccuaucaauauugucucugcuguguaaauaguucugagUAGUGCAAUAUUGCUUAUAGGGuuuugguguuugggaagaa
...............((.((((((.((((((((((((((((((((((((.(((((....)))))...)))....)))))))))...)))))))))))).))))))))....

Structure

aaaaaauucuguuug  a      c            ---         ----   --u     g 
               uc ccagau cuagaacccuau   caauauugu    cuc   gcugu u
               || |||||| ||||||||||||   |||||||||    |||   |||||  
               ag gguuug gguuuuGGGAUA   GUUAUAACG    gag   ugaua a
-----------aaga  -      u            UUC         UGAU   ucu     a 

Annotation confidence Not enough data

Genome context

NW_002962513.1: 2376800-2376910 [+]

Mature ppy-miR-454

• Accession: MIMAT0024367
• Description: Pongo pygmaeus ppy-miR-454 mature miRNA
• Sequence: 71 - UAGUGCAAUAUUGCUUAUAGGG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116