Stem-loop ppy-mir-4791

Accession

MI0020928

Description

Pongo pygmaeus ppy-mir-4791 precursor miRNA

Sequence

agcuaauacaauuuaagaacUGGAUAUGAUGACUGAAAuaagcuccauaucaacgagaauuucgaugggauuaugugcagucaauguccaguaauuagaaaagcuauc
((((.......(((((..(((((((((..((((((..((((..(((((.....(((.....)))))))).))))...)))))))))))))))..)))))..))))...

Structure

---    aauacaa     ga         GA      -AA    gc     aucaa   g 
   agcu       uuuaa  acUGGAUAU  UGACUG   Auaa  uccau     cga a
   ||||       |||||  |||||||||  ||||||   ||||  |||||     ||| a
   ucga       agauu  ugaccugua  acugac   uauu  gggua     gcu u
cua    -----aa     aa         --      gug    -a     -----   u 

Annotation confidence Not enough data

Genome context

chr3: 128181422-128181529 [+]

Mature ppy-miR-4791

• Accession: MIMAT0024380
• Description: Pongo pygmaeus ppy-miR-4791 mature miRNA
• Sequence: 21 - UGGAUAUGAUGACUGAAA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116