Stem-loop ppy-mir-4667

Accession

MI0020934

Description

Pongo pygmaeus ppy-mir-4667 precursor miRNA

Sequence

ccuagagguugagguucUGACUGGGGAGCAGAAGGAGAacccaagaaaagcugacuuggaggucccuccuucuguccccacaggacuuuggccuggaugugccugcuuuccg
.....((((((((((((((..((((((.(((((((((..((((((.........))))).)....)))))))))))))))))))))))))))))(((.((....))..))).

Structure

-------------ccuag              AC      G         --Aa -     aaa 
                  agguugagguucUG  UGGGGA CAGAAGGAG    c ccaag   a
                  ||||||||||||||  |||||| |||||||||    | |||||   g
                  uccgguuucaggac  accccu gucuuccuc    g gguuc   c
gccuuucguccguguagg              --      -         ccug a     agu 

Annotation confidence Not enough data

Genome context

chr9: 25952504-25952615 [-]

Mature ppy-miR-4667

• Accession: MIMAT0024386
• Description: Pongo pygmaeus ppy-miR-4667 mature miRNA
• Sequence: 18 - UGACUGGGGAGCAGAAGGAGA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116