Stem-loop ppy-mir-4526

Accession

MI0020941

Description

Pongo pygmaeus ppy-mir-4526 precursor miRNA

Sequence

agccacguggaggacccugcggugacaucagggcccagucccugcugucaugccccaggugacgugcuggGCUGACAGCAGGGCCGGCCACuaacgucacuguccuggcuu
(((((......((((.....((((((...((((((..(.(((((((((((.((((.((........)))))))))))))))))).)))).))...))))))))))))))).

Structure

-     cgugga    ccugc      auc  -    ca u           u    c  gug 
 agcca      ggac     ggugac   ag ggcc  g cccugcuguca gccc ag   a
 |||||      ||||     ||||||   || ||||  | ||||||||||| |||| ||    
 ucggu      ccug     ucacug   uC CCGG  C GGGACGACAGU CGgg uc   c
u     ------    -----      caa  A    -C -           -    -  gug 

Annotation confidence Not enough data

Genome context

chr18: 18432518-18432628 [-]

Mature ppy-miR-4526

• Accession: MIMAT0024393
• Description: Pongo pygmaeus ppy-miR-4526 mature miRNA
• Sequence: 71 - GCUGACAGCAGGGCCGGCCAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116