miRBase entry: ppy-mir-151b

Stem-loop ppy-mir-151b

Accession

MI0020942

Description

Pongo pygmaeus ppy-mir-151b precursor miRNA

Sequence

ucaccagacaccucugaugugucagucucucuucagggcucccgagacacagaaacagacaccugcccUCCAGGAGCUCACAGUCUAGacaaacgaacccaggguccaaa
.........(((.(((...(((..((((.......(((((((.(((...(((..........)))..)))..))))))).......))))..)))....)))))).....

Structure

ucaccagac   u   -aug   ca    cucuuca       -c   aca   aaac 
         acc cug    ugu  gucu       gggcucc  gag   cag    a
         ||| |||    |||  ||||       |||||||  |||   |||     
         ugg gac    gca  caGA       CUCGAGG  CUc   guc    g
----aaacc   -   ccaa   aa    UCUGACA       AC   -cc   caca

Annotation confidence Not enough data

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Genome context

chr14: 101636045-101636154 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-151b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-151b

Accession	MIMAT0024394
Description	Pongo pygmaeus ppy-miR-151b mature miRNA
Sequence	69 - UCCAGGAGCUCACAGUCUAG - 88
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116