Stem-loop ppy-mir-4672

Accession

MI0020946

Description

Pongo pygmaeus ppy-mir-4672 precursor miRNA

Sequence

cagucugacgccggaggucaggcugcuucucgccucuguccagcuguguggccuuggacaagccucuuggucACACAGCUGGACAGAGGGACGAaacagccugaccugagaggc
.........(((..(((((((((((.(((((.(((((((((((((((((((((..(((......))).))))))))))))))))))))))).))).)))))))))))....)))

Structure

cagucugac   --gg           c   -  g                     uu   ca 
         gcc    aggucaggcug uuc uc ccucuguccagcuguguggcc  gga  a
         |||    ||||||||||| ||| || |||||||||||||||||||||  |||   
         cgg    uccaguccgac aAG AG GGAGACAGGUCGACACAcugg  ucu  g
---------   agag           a   C  -                     -u   cc 

Annotation confidence Not enough data

Genome context

chr9: 124789338-124789451 [-]

Mature ppy-miR-4672

• Accession: MIMAT0024398
• Description: Pongo pygmaeus ppy-miR-4672 mature miRNA
• Sequence: 73 - ACACAGCUGGACAGAGGGACGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116