Stem-loop mes-MIR408

Accession

MI0020968

Description

Manihot esculenta mes-MIR408 precursor miRNA

Literature search

4 open access papers mention mes-MIR408
(12 sentences)

Sequence

gaggguaaagaaagagacggacaaagacugggaacaggcagagcauggguggaacuauuaacacaaguaucuguuuuagcaccacccAUGCACUGCCUCUUCCCUGGCuugcgggucuucuuuuucugcucccu
.((((...(((((((((.((((.(((...(((((.((((((.((((((((((..(((..((((........)))).)))..)))))))))).)))))).)))))...)))....)))))))))))))...))))

Structure

g    uaa         c    ---a   acu     c      a          aa   uu    caa 
 aggg   agaaagaga ggac    aag   gggaa aggcag gcaugggugg  cua  aaca   g
 ||||   ||||||||| ||||    |||   ||||| |||||| ||||||||||  |||  ||||    
 uccc   ucuuuuucu ucug    uuC   CCCUU UCCGUC CGUAcccacc  gau  uugu   u
-    ucg         -    ggcg   GGU     C      A          ac   -u    cua 

Annotation confidence Not enough data

Genome context

scaffold00080: 302009-302142 [-]

Mature mes-miR408

• Accession: MIMAT0024419
• Description: Manihot esculenta mes-miR408 mature miRNA
• Sequence: 88 - AUGCACUGCCUCUUCCCUGGC - 108
• Evidence: not_experimental

References

1. Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement
   "Amiteye S, Corral JM, Sharbel TF"
   African J Biotech. (2011) 10:2562-2573