miRBase entry: mse-mir-3286

Stem-loop mse-mir-3286

Accession

MI0020970

Description

Manduca sexta mse-mir-3286 precursor miRNA

Sequence

gggaaugacgaagcccaaaauaacuauuggucacugcacaggaauaguaaauugaguauacucUUGUGCGUGUUCCAAUAGUUCUuaugggugcuucaua
....((((.(..(((((.((.(((((((((.(((.(((((((((((.(......).)))..)))))))))))..))))))))).)).))))).).)))).

Structure

ggga    c aa     a  u         -u   u        --   g aa 
    auga g  gccca aa aacuauugg  cac gcacagga  aua u  a
    |||| |  ||||| || |||||||||  ||| ||||||||  ||| |   
    uacu c  ugggu uU UUGAUAACC  GUG CGUGUUcu  uau a  u
---a    u -g     a  C         UU   -        ca   g gu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH668480.1: 131623-131722 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-3286

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-3286

Accession	MIMAT0024421
Description	Manduca sexta mse-miR-3286 mature miRNA
Sequence	64 - UUGUGCGUGUUCCAAUAGUUCU - 85
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395