miRBase entry: mse-mir-998

Stem-loop mse-mir-998

Accession

MI0020972

Description

Manduca sexta mse-mir-998 precursor miRNA

Sequence

gggugugcgggaccuggcgcggccgcgagcugcaucccgugcggcugcagugcugcgugUAGCACCAUGGGAUUCAGCUCAcggcgcgccacuaacagcc
((.(((..((....(((((((.(((.((((((.((((((((..((((((........))))))..)))))))).)))))).)))))))))))).))).))

Structure

  g   gc  gacc       g   c      c        cg      gug 
gg ugu  gg    uggcgcg ccg gagcug aucccgug  gcugca   c
|| |||  ||    ||||||| ||| |||||| ||||||||  ||||||    
cc aca  uc    accgcgc ggc CUCGAC UAGGGUAC  CGAUgu   u
  g   -a  ----       -   A      U        CA      gcg

Annotation confidence Not enough data

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Genome context

JH668351.1: 967040-967139 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-998

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-998

Accession	MIMAT0024423
Description	Manduca sexta mse-miR-998 mature miRNA
Sequence	60 - UAGCACCAUGGGAUUCAGCUCA - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395