miRBase entry: mse-mir-989

Stem-loop mse-mir-989


Accession
MI0020980
Description
Manduca sexta mse-mir-989 precursor miRNA


Sequence

gaaguucaggguugaaauggccauuaccucacagucacguggucauguugguacaacGUGUGAUGUGACGUAGUGGAAGucucgaccugaacguaucguc
...(((((((.((((.((..(((((((......(((((((.(.(((((((...)))))))).))))))))))))))..)).)))))))))))........

Structure
-----gaa       g    a  gg       cucaca       g u       g 
        guucagg uuga au  ccauuac      gucacgu g cauguug  
        ||||||| |||| ||  |||||||      ||||||| | ||||||| u
        caagucc agcu uG  GGUGAUG      CAGUGUA U GUGcaac  
cugcuaug       -    c  AA       ------       G -       a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH668636.1: 197036-197135 [-]

Database links

Mature mse-miR-989

Accession MIMAT0024431
Description Manduca sexta mse-miR-989 mature miRNA
Sequence 58 - GUGUGAUGUGACGUAGUGGAAG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395