Stem-loop mse-mir-1000

Accession

MI0020990

Description

Manduca sexta mse-mir-1000 precursor miRNA

Sequence

gcccgccagccgccagcgcgccccgaccAUAUUGUCCUGUCACAGCAGUAcugccugguuacugcugcgccgggacaagcggucguggcgucgcaccaucau
...............(((((((.(((((...((((((((.(.((((((((((....)).)))))))).).))))))))..))))).)))).)))........

Structure

gcccgccagccgcca   -    c     AUA        U A        -  g 
               gcg cgcc cgacc   UUGUCCUG C CAGCAGUA cu c
               ||| |||| |||||   |||||||| | |||||||| ||  
               cgc gcgg gcugg   aacagggc g gucgucau gg c
-------uacuacca   u    u     -cg        c c        u  u 

Annotation confidence Not enough data

Genome context

JH668702.1: 201373-201474 [-]

Mature mse-miR-1000

• Accession: MIMAT0024441
• Description: Manduca sexta mse-miR-1000 mature miRNA
• Sequence: 29 - AUAUUGUCCUGUCACAGCAGUA - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395